Rahul Singh

Dr. Singh
Bioinformatics, Computational Drug Discovery, Multimedia Information Systems, Biological Imaging

Contact Information

(415) 338-2307

Office Information: 

Thornton Hall
Room Number: 
No summer office hours, office hours begin the first week of the Fall 2019 semester

Recent Projects


  1. R. Eshleman and R. Singh, “Reconstructing the Temporal Progression of Biological Data Using Cluster Spanning Trees”, Accepted, IEEE Transactions on NanoBioscience, 2017
  2. T. Olson** and R. Singh, “Predicting Anatomic Therapeutic Chemical Classification Codes using Tiered Learning”, Accepted, BMC Bioinformatics, 2017
  3. R. Eshleman** and R. Singh, “Leveraging Graph Topology and Semantic Context for Pharmacovigilance through Twitter Streams”, BMC Bioinformatics, Vol. 17 (Suppl. 13): 335, 2016 
  4. J. Dohrmann** and R. Singh “The SMAL web server: global multiple network alignment from pairwise alignments”, Bioinformatics, Vol. 32 (21), pp. 3330-3332, 2016 


  1. NIH-R01: An Automated High-Throughput Phenotypic Screen for Schistosomiasis Drug Discovery, National Institutes for Health, Joint-PI.
  2. Designing Systems for Molecular Query-Retrieval and Molecular Informatics, National Science Foundation, National Science Foundation, PI
  3. William and Melinda Gates Foundation: Development of a Macrofilaricidal Drug Candidate for the Treatment of Human Onchocerciasis, Co-PI


Dr. Singh Website